galign Tool name | galign |
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URL | http://shahamlab.rockefeller.edu/galign |
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Important features | 1. Used for SNP discovery.
2. Has alignment method, SNP search, deletion search, simple SNP, Format convert, genome assemble, identifies polymorphisms between sequence reads obtained using Illumina/Solexa technology and a reference genome. |
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Citations | Shaham S. galign: a tool for rapid genome polymorphism discovery. PLoS One. 2009 Sep 25; 4(9):e7188. PubMed PMID: 19779626; PubMed Central PMCID: PMC2746318 |
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Year of publication | 2009 |
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Rank by usage frequency | 100 |
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Comments | |
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Function | SNP discovery |
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Category | Free, Downloadable |
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License | GPL |
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Status | |
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Input file format | |
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Output file format | text file |
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Operating system | MacOSX Intel |
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Operating language | |
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Platform | Illumina/Solexa |
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Maintained by | |
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Downloadable file format | |
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Submission file format | |
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